PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo0G0136300
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family bHLH
Protein Properties Length: 96aa    MW: 10633 Da    PI: 8.5472
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo0G0136300genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.5e-0523601855
                    HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +  ++L++llP+ +   ++ +   +++ ++A+++I+ Lq
  Spipo0G0136300 23 DLVSRLQSLLPEgR-TRGNDRIPPSQVIQEACKHIRGLQ 60
                    56689*******77.678888888**************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-61977IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-52279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MSSRRSRTRQ SISTRITDDK VMDLVSRLQS LLPEGRTRGN DRIPPSQVIQ EACKHIRGLQ  60
RQVDGLSQRL SELLTAEEIT DAQALQVGLS MDEAS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009395121.14e-28PREDICTED: transcription factor ILI6-like
SwissprotA2Z7304e-25ILI7_ORYSI; Transcription factor ILI7
SwissprotQ338G64e-25ILI7_ORYSJ; Transcription factor ILI7
TrEMBLM0SJX05e-28M0SJX0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P00530_0011e-27(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26753378
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.13e-20bHLH family protein